STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE97665.1Helix-turn-helix. (162 aa)    
Predicted Functional Partners:
SHG12355.1
Streptomyces sporulation and cell division protein, SsgA.
  
   
 0.795
SHE52965.1
Hypothetical protein.
  
   
 0.732
pyrR
Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.
     
 0.714
tmk
dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
  
    0.706
SHE71518.1
Dipeptidyl aminopeptidase/acylaminoacyl peptidase.
  
     0.689
SHF53548.1
Protein of unknown function.
  
   
 0.679
SHF41606.1
Hypothetical protein.
  
     0.674
SHF45076.1
Predicted RNA-binding protein containing a PIN domain.
  
     0.668
SHF29964.1
Serine/threonine-protein kinase RsbW.
  
     0.646
SHF04261.1
Transcriptional regulator.
  
     0.623
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.