STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF00364.13-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit. (104 aa)    
Predicted Functional Partners:
SHF82862.1
Reductase C-terminal.
  
 0.944
SHF60905.1
Reductase C-terminal.
  
 0.940
SHH10169.1
Reductase C-terminal.
  
 0.940
SHG36773.1
Nitrite reductase (NADH) large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 0.938
SHG36711.1
Assimilatory nitrate reductase electron transfer subunit.
  
 0.931
SHF00333.1
Iron-regulated ABC transporter permease protein SufD.
 
     0.856
SHF00287.1
Iron-regulated ABC transporter membrane component SufB.
 
     0.855
SHF85297.1
Respiratory nitrate reductase beta subunit.
  
 
 0.845
SHF85437.1
Respiratory nitrate reductase beta subunit.
  
 
 0.845
SHF40375.1
ferredoxin--NADP+ reductase.
     
 0.843
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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