STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF00784.1ATP-binding cassette, subfamily C. (607 aa)    
Predicted Functional Partners:
SHF00694.1
Lanthionine synthetase C-like protein.
 
     0.885
SHF38967.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
     
0.854
SHF00754.1
ATP-binding cassette, subfamily B.
 
    
0.841
metN
D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
     
0.812
SHF08256.1
ATP-binding cassette, subfamily B.
 
 
 
0.779
SHG87138.1
Serine/threonine protein kinase.
  
     0.763
SHE56704.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
     
0.730
SHE67480.1
ATP-binding cassette, subfamily C, CydCD.
  
 
 
0.669
SHG69553.1
Amino acid adenylation domain-containing protein.
  
 
 0.663
SHF54302.1
Acyl transferase domain-containing protein.
  
 0.597
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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