STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF01210.1Heterodimeric methylmalonyl-CoA mutase small subunit. (627 aa)    
Predicted Functional Partners:
SHF01243.1
methylmalonyl-CoA mutase.
 
0.999
SHG03694.1
methylmalonyl-CoA mutase, N-terminal domain.
 
0.999
SHG01207.1
(R)-ethylmalonyl-CoA mutase.
 
0.998
SHF01275.1
methylmalonyl-CoA mutase metallochaperone MeaB.
  
 0.993
SHG03121.1
methylmalonyl-CoA epimerase.
 
  
 0.984
SHG51699.1
methylmalonyl-CoA mutase, C-terminal domain.
 0.972
SHE45964.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.968
SHG03170.1
LAO/AO transport system kinase.
  
 0.956
sucD
succinyl-CoA synthetase alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
    
 0.909
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
    
 0.895
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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