STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF01884.1Tryptophan 2-C-methyltransferase. (557 aa)    
Predicted Functional Partners:
SHG73773.1
TraM recognition site of TraD and TraG.
  
     0.695
SHG73643.1
Hypothetical protein.
  
     0.683
SHF84472.1
DNA-binding transcriptional regulator, MerR family.
  
     0.664
SHG73901.1
Conjugative relaxase domain-containing protein, TrwC/TraI family.
  
     0.619
SHF80242.1
hygromycin-B 7''-O-kinase.
  
     0.584
SHG80911.1
RHS repeat-associated core domain-containing protein.
  
     0.561
SHG73678.1
Hypothetical protein.
  
     0.553
SHF82094.1
Bifunctional DNA primase/polymerase, N-terminal.
  
     0.526
SHG11825.1
Polyphosphate:nucleotide phosphotransferase, PPK2 family.
   
    0.514
SHF54502.1
Beta-lactamase class A.
  
     0.492
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.