STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF04734.1Zn-dependent protease (includes SpoIVFB); Belongs to the peptidase M50B family. (360 aa)    
Predicted Functional Partners:
SHG67859.1
Tagatose 6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family.
  
    0.854
SHF85237.1
MFS transporter, NNP family, nitrate/nitrite transporter.
  
    0.771
SHF40179.1
CBS domain-containing protein.
  
    0.678
SHF29124.1
CBS domain-containing protein.
  
    0.678
SHF01468.1
Hypothetical protein.
  
    0.669
SHF70330.1
Nitroreductase.
  
    0.669
SHF04771.1
tRNA (adenine57-N1/adenine58-N1)-methyltransferase; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA.
       0.667
SHE65070.1
Transcriptional regulator, contains XRE-family HTH domain.
  
     0.582
SHE57828.1
Hypothetical protein.
  
     0.523
SHE42504.1
Chaperone protein HscA; Belongs to the heat shock protein 70 family.
 
     0.510
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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