STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF06287.1Alpha/beta hydrolase fold. (447 aa)    
Predicted Functional Partners:
SHG69585.1
Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein.
   
 0.880
SHG69553.1
Amino acid adenylation domain-containing protein.
   
 0.856
SHG60643.1
Amino acid adenylation domain-containing protein.
   
  0.664
SHG24287.1
TAP-like protein.
  
     0.616
SHF01502.1
Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein.
   
 0.566
SHF54302.1
Acyl transferase domain-containing protein.
  
  0.561
SHF85811.1
Nonribosomal peptide synthetase protein BlmVI.
   
  0.493
SHF06370.1
Cysteine synthase A.
  
    0.442
SHF06312.1
Argininosuccinate lyase.
       0.435
SHF06339.1
Putative heavy-metal chelation.
       0.435
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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