STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF08548.1Protein N-acetyltransferase, RimJ/RimL family. (187 aa)    
Predicted Functional Partners:
SHF31476.1
Glutamate synthase (NADPH/NADH) large chain.
   
 
  0.712
SHG79360.1
Diamine N-acetyltransferase.
   
 
  0.650
SHG79390.1
Diamine N-acetyltransferase.
   
 
  0.650
SHE45964.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.614
SHG48783.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.568
SHF07106.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.488
SHF08584.1
Ricin-type beta-trefoil lectin domain-containing protein.
       0.456
SHF08622.1
Predicted ATPase.
 
     0.425
SHF08510.1
Hypothetical protein.
       0.420
rnc
RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
   
    0.416
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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