STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF09635.1ATPase family associated with various cellular activities (AAA). (640 aa)    
Predicted Functional Partners:
SHF09688.1
Protein of unknown function.
 
     0.948
SHF09558.1
Hypothetical protein.
 
     0.943
SHF09532.1
Conserved hypothetical phage tail region protein.
 
     0.940
SHF09611.1
Protein of unknown function.
 
     0.940
SHF09507.1
Hypothetical protein.
     0.938
SHE75766.1
Hypothetical protein.
    
 
 0.932
SHF09746.1
Hypothetical protein.
 
     0.922
SHF09804.1
Phage protein D.
 
     0.909
SHF09835.1
Hypothetical protein.
 
     0.901
SHF09923.1
Putative baseplate assembly protein.
 
     0.875
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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