STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF15351.1Alkylhydroperoxidase AhpD family core domain-containing protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (154 aa)    
Predicted Functional Partners:
SHF53793.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
    0.615
SHF07739.1
RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family.
 
    0.604
SHF41655.1
RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family.
 
    0.584
SHF15320.1
Hypothetical protein.
       0.564
SHF86942.1
RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family.
 
    0.544
SHF57346.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
    0.537
SHH00117.1
Peroxiredoxin (alkyl hydroperoxide reductase subunit C).
  
  
 0.487
SHF69552.1
3-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylase.
    
 0.460
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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