STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE93014.1Hypothetical protein. (294 aa)    
Predicted Functional Partners:
SHE92979.1
Putative DNA-binding domain-containing protein.
 
  
 0.979
SHH11725.1
Putative DNA-binding domain-containing protein.
 
  
 0.909
SHE93052.1
Hypothetical protein.
       0.773
SHE92945.1
Hypothetical protein.
       0.528
SHE93119.1
Poly-gamma-glutamate synthesis protein (capsule biosynthesis protein).
       0.476
SHE93085.1
DNA polymerase (family 10).
       0.476
SHG73678.1
Hypothetical protein.
   
    0.456
SHF13390.1
Plasma-membrane calcium-translocating P-type ATPase.
   
    0.453
SHE64567.1
Inner membrane component of T3SS domain-containing protein.
   
    0.420
SHE64606.1
FHA domain-containing protein.
   
    0.420
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.