STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF16879.1PucR C-terminal helix-turn-helix domain-containing protein. (451 aa)    
Predicted Functional Partners:
SHF16846.1
Lipase (class 2).
 
     0.567
SHH00663.1
Transcriptional regulator, TetR family.
  
     0.521
SHG06509.1
Cysteine dioxygenase type I.
  
    0.515
SHF62173.1
Asparagine synthase (glutamine-hydrolysing).
  
     0.505
SHF89864.1
Predicted ATPase.
  
    0.466
SHG36105.1
PD-(D/E)XK nuclease superfamily protein.
  
     0.429
SHF84044.1
Putative drug exporter of the RND superfamily.
  
   
 0.414
SHG13572.1
Lysophospholipase L1.
  
     0.413
SHF16630.1
S-formylglutathione hydrolase FrmB.
 
     0.409
SHE56973.1
S-formylglutathione hydrolase FrmB.
 
     0.402
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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