STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF29503.1Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family. (138 aa)    
Predicted Functional Partners:
SHF29374.1
PAS domain S-box-containing protein.
 
 0.952
SHF02124.1
Serine phosphatase RsbU, regulator of sigma subunit.
 
 0.910
SHF29825.1
STAS domain-containing protein.
 
 0.910
SHF29964.1
Serine/threonine-protein kinase RsbW.
 
 0.891
SHF02201.1
Serine/threonine-protein kinase RsbT.
 
 0.885
SHF02162.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
 
 0.874
SHF01978.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
 0.843
SHF02431.1
Serine/threonine-protein kinase RsbW.
 
 0.833
SHF02467.1
RNA polymerase sigma-B factor; Belongs to the sigma-70 factor family.
 
 
 0.809
SHF29991.1
RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; Belongs to the sigma-70 factor family.
 
 
 0.807
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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