STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF30211.1Regulatory protein, luxR family. (221 aa)    
Predicted Functional Partners:
SHF28714.1
Regulatory protein, luxR family.
 
   0.724
SHG82349.1
Regulatory protein, luxR family.
 
   0.719
SHF27541.1
Regulatory protein, luxR family.
  
   0.678
SHH00540.1
Regulatory protein, luxR family.
  
   0.678
SHH00569.1
Regulatory protein, luxR family.
  
   0.678
SHF82536.1
Transcriptional regulator, ArsR family.
  
     0.548
SHF30184.1
Hypothetical protein.
       0.457
SHG27490.1
Glyoxylase, beta-lactamase superfamily II.
  
 
   0.445
SHG25107.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
  
 
   0.423
SHE72033.1
Glyoxylase, beta-lactamase superfamily II.
  
 
   0.419
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.