STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF34710.1Alpha-1,2-mannosyltransferase. (429 aa)    
Predicted Functional Partners:
SHG37161.1
Voltage-gated potassium channel.
  
    0.606
SHE42757.1
Type VII secretion protein EccB.
  
 
   0.557
SHF34741.1
Hypothetical protein.
       0.548
SHF34769.1
ABC-2 type transport system ATP-binding protein.
       0.548
SHF34804.1
GntR family transcriptional regulator.
       0.518
SHG37313.1
Predicted membrane protein.
   
    0.517
SHG32985.1
Alpha-1,2-mannosyltransferase.
  
 
 
0.512
SHG67429.1
Hypothetical protein.
  
 
   0.506
SHE47492.1
Alpha-1,2-mannosyltransferase.
  
 
 
0.502
SHH05712.1
Type VII secretion protein EccB.
  
 
   0.496
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.