Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHE66875.1 | SHF36459.1 | SAMN05444320_101730 | SAMN05444320_103359 | Uncharacterized protein YcsI, UPF0317 family; Belongs to the D-glutamate cyclase family. | Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase). | 0.500 |
| SHE66875.1 | SHF36496.1 | SAMN05444320_101730 | SAMN05444320_103360 | Uncharacterized protein YcsI, UPF0317 family; Belongs to the D-glutamate cyclase family. | Mn2+ and Fe2+ transporters of the NRAMP family. | 0.950 |
| SHE66875.1 | SHF36557.1 | SAMN05444320_101730 | SAMN05444320_103362 | Uncharacterized protein YcsI, UPF0317 family; Belongs to the D-glutamate cyclase family. | Sensor histidine kinase inhibitor, KipI family. | 0.943 |
| SHE66875.1 | SHF36599.1 | SAMN05444320_101730 | SAMN05444320_103363 | Uncharacterized protein YcsI, UPF0317 family; Belongs to the D-glutamate cyclase family. | Biotin-dependent carboxylase uncharacterized domain-containing protein. | 0.884 |
| SHE66875.1 | pxpA | SAMN05444320_101730 | SAMN05444320_103361 | Uncharacterized protein YcsI, UPF0317 family; Belongs to the D-glutamate cyclase family. | UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.862 |
| SHE75865.1 | SHF36496.1 | SAMN05444320_101992 | SAMN05444320_103360 | Zinc/manganese transport system permease protein. | Mn2+ and Fe2+ transporters of the NRAMP family. | 0.505 |
| SHF13390.1 | SHF36496.1 | SAMN05444320_102612 | SAMN05444320_103360 | Plasma-membrane calcium-translocating P-type ATPase. | Mn2+ and Fe2+ transporters of the NRAMP family. | 0.444 |
| SHF36430.1 | SHF36496.1 | SAMN05444320_103358 | SAMN05444320_103360 | Transcriptional regulator, GntR family. | Mn2+ and Fe2+ transporters of the NRAMP family. | 0.541 |
| SHF36459.1 | SHE66875.1 | SAMN05444320_103359 | SAMN05444320_101730 | Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase). | Uncharacterized protein YcsI, UPF0317 family; Belongs to the D-glutamate cyclase family. | 0.500 |
| SHF36459.1 | SHF36496.1 | SAMN05444320_103359 | SAMN05444320_103360 | Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase). | Mn2+ and Fe2+ transporters of the NRAMP family. | 0.662 |
| SHF36459.1 | SHF36557.1 | SAMN05444320_103359 | SAMN05444320_103362 | Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase). | Sensor histidine kinase inhibitor, KipI family. | 0.678 |
| SHF36459.1 | SHF36599.1 | SAMN05444320_103359 | SAMN05444320_103363 | Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase). | Biotin-dependent carboxylase uncharacterized domain-containing protein. | 0.679 |
| SHF36459.1 | pxpA | SAMN05444320_103359 | SAMN05444320_103361 | Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase). | UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.666 |
| SHF36496.1 | SHE66875.1 | SAMN05444320_103360 | SAMN05444320_101730 | Mn2+ and Fe2+ transporters of the NRAMP family. | Uncharacterized protein YcsI, UPF0317 family; Belongs to the D-glutamate cyclase family. | 0.950 |
| SHF36496.1 | SHE75865.1 | SAMN05444320_103360 | SAMN05444320_101992 | Mn2+ and Fe2+ transporters of the NRAMP family. | Zinc/manganese transport system permease protein. | 0.505 |
| SHF36496.1 | SHF13390.1 | SAMN05444320_103360 | SAMN05444320_102612 | Mn2+ and Fe2+ transporters of the NRAMP family. | Plasma-membrane calcium-translocating P-type ATPase. | 0.444 |
| SHF36496.1 | SHF36430.1 | SAMN05444320_103360 | SAMN05444320_103358 | Mn2+ and Fe2+ transporters of the NRAMP family. | Transcriptional regulator, GntR family. | 0.541 |
| SHF36496.1 | SHF36459.1 | SAMN05444320_103360 | SAMN05444320_103359 | Mn2+ and Fe2+ transporters of the NRAMP family. | Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase). | 0.662 |
| SHF36496.1 | SHF36557.1 | SAMN05444320_103360 | SAMN05444320_103362 | Mn2+ and Fe2+ transporters of the NRAMP family. | Sensor histidine kinase inhibitor, KipI family. | 0.943 |
| SHF36496.1 | SHF36599.1 | SAMN05444320_103360 | SAMN05444320_103363 | Mn2+ and Fe2+ transporters of the NRAMP family. | Biotin-dependent carboxylase uncharacterized domain-containing protein. | 0.932 |
page 1 of 2