STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF40433.1Protein of unknown function; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA. (165 aa)    
Predicted Functional Partners:
SHG51943.1
Chorismate mutase.
  
     0.774
SHF34471.1
Phage shock protein A (PspA) family protein.
  
     0.773
SHE41023.1
Hypothetical protein.
  
     0.770
SHF37270.1
Protein of unknown function.
  
     0.770
SHF28801.1
Hypothetical protein.
  
     0.769
SHE75316.1
Hypothetical protein.
  
     0.758
SHG49830.1
Hypothetical protein.
  
     0.751
SHG09809.1
Chorismate mutase.
  
     0.745
SHF39668.1
Ribosomal protein S18 acetylase RimI.
  
     0.735
SHG90487.1
Protein of unknown function.
  
     0.735
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.