STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF41995.1TIGR03943 family protein. (282 aa)    
Predicted Functional Partners:
SHF42029.1
Hypothetical protein.
 
  
 0.979
SHF42092.1
Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
       0.561
SHF42060.1
Hypothetical protein.
       0.549
SHF39596.1
TIGR03083 family protein.
  
     0.514
SHE74924.1
FhuF 2Fe-2S C-terminal domain-containing protein.
  
     0.498
recO
DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination.
       0.494
SHG97670.1
Protein of unknown function.
  
     0.484
SHF44603.1
S-formylglutathione hydrolase FrmB.
  
     0.452
SHF42153.1
Protein of unknown function.
 
     0.441
SHF42239.1
Hypothetical protein.
 
     0.440
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.