STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF42060.1Hypothetical protein. (166 aa)    
Predicted Functional Partners:
SHF42092.1
Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
  
 0.899
recO
DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination.
     
 0.786
SHG49974.1
Hypothetical protein.
  
     0.773
SHF38831.1
Hypothetical protein.
  
     0.767
SHG36186.1
PQQ-like domain-containing protein.
  
     0.767
SHE56489.1
Hypothetical protein.
  
     0.766
SHE65355.1
Hypothetical protein.
  
     0.766
SHH01733.1
Protein of unknown function.
  
     0.765
SHE41062.1
Anti-sigma-D factor RsdA to sigma factor binding region.
  
     0.763
SHE66499.1
Protein of unknown function.
  
     0.763
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.