STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF44180.1Subtilase family protein; Belongs to the peptidase S8 family. (492 aa)    
Predicted Functional Partners:
SHE42757.1
Type VII secretion protein EccB.
   
 
 0.894
SHG81027.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
  
  
  0.774
SHH00338.1
FtsK/SpoIIIE family protein.
 
 
 0.710
SHE58454.1
FtsK/SpoIIIE family protein.
  
 
 0.642
SHE42544.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
 
 0.642
SHH05767.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
 
 0.642
SHG67429.1
Hypothetical protein.
    
  0.570
SHH08237.1
Hypothetical protein.
    
  0.570
SHG82385.1
Peptidase inhibitor I9; Belongs to the peptidase S8 family.
 
 
0.487
secY
Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
    
   0.473
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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