STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF44958.1Phosphatidylinositol alpha-1,6-mannosyltransferase. (377 aa)    
Predicted Functional Partners:
SHG12586.1
KDO2-lipid IV(A) lauroyltransferase.
 
  
 0.762
SHF68219.1
KDO2-lipid IV(A) lauroyltransferase.
 
  
 0.736
SHF44990.1
Hypothetical protein.
       0.696
SHG37428.1
ATP-dependent DNA helicase, Rep family.
    
   0.652
SHF92043.1
Hypothetical protein.
    
   0.649
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.647
SHF13163.1
Maltooligosyl trehalose hydrolase.
   
 0.633
SHE76168.1
Trehalose 6-phosphatase.
  
 0.612
SHE72352.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
    0.607
SHG45924.1
Hypothetical protein.
  
     0.603
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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