STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF44990.1Hypothetical protein. (456 aa)    
Predicted Functional Partners:
SHF44958.1
Phosphatidylinositol alpha-1,6-mannosyltransferase.
       0.696
SHE97448.1
Hypothetical protein.
  
     0.693
SHF41681.1
Serpin B; Belongs to the serpin family.
   
  0.615
SHF45021.1
Cell wall-associated hydrolase, NlpC family.
  
    0.601
SHG90992.1
TIGR02678 family protein.
  
     0.592
SHE56973.1
S-formylglutathione hydrolase FrmB.
 
    0.558
SHG74799.1
Hypothetical protein.
  
     0.515
SHG56177.1
Tricorn protease; Degrades oligopeptides; Belongs to the peptidase S41B family.
 
  
 0.510
SHG92763.1
Methyltransferase, FkbM family.
  
     0.496
SHF27072.1
Phosphoribosylanthranilate isomerase.
  
     0.493
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.