STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF60993.1DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. (219 aa)    
Predicted Functional Partners:
SHF60967.1
Signal transduction histidine kinase.
  0.961
SHE56825.1
Signal transduction histidine kinase.
 
  0.837
SHG38249.1
Signal transduction histidine kinase.
 
  0.837
SHF15120.1
Signal transduction histidine kinase.
 
  0.836
SHF83862.1
Histidine kinase-like ATPase domain-containing protein.
 
  0.836
SHH11330.1
Signal transduction histidine kinase.
 
  0.834
SHG86251.1
Signal transduction histidine kinase.
 
  0.824
SHE60012.1
Signal transduction histidine kinase.
  
   0.776
SHF61234.1
Signal transduction histidine kinase.
  
   0.775
SHG09179.1
Two-component system, NarL family, sensor kinase.
  
  0.758
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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