Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHF63405.1 | SHF63431.1 | SAMN05444320_104346 | SAMN05444320_104347 | Hypothetical protein. | TIGR02679 family protein. | 0.773 |
SHF63405.1 | SHF63452.1 | SAMN05444320_104346 | SAMN05444320_104348 | Hypothetical protein. | Putative exonuclease SbcCD, C subunit. | 0.773 |
SHF63405.1 | SHF63481.1 | SAMN05444320_104346 | SAMN05444320_104349 | Hypothetical protein. | Protein of unknown function. | 0.773 |
SHF63405.1 | SHF63510.1 | SAMN05444320_104346 | SAMN05444320_104350 | Hypothetical protein. | TIGR02677 family protein. | 0.773 |
SHF63431.1 | SHF63405.1 | SAMN05444320_104347 | SAMN05444320_104346 | TIGR02679 family protein. | Hypothetical protein. | 0.773 |
SHF63431.1 | SHF63452.1 | SAMN05444320_104347 | SAMN05444320_104348 | TIGR02679 family protein. | Putative exonuclease SbcCD, C subunit. | 0.906 |
SHF63431.1 | SHF63481.1 | SAMN05444320_104347 | SAMN05444320_104349 | TIGR02679 family protein. | Protein of unknown function. | 0.793 |
SHF63431.1 | SHF63510.1 | SAMN05444320_104347 | SAMN05444320_104350 | TIGR02679 family protein. | TIGR02677 family protein. | 0.793 |
SHF63431.1 | SHG43677.1 | SAMN05444320_104347 | SAMN05444320_10924 | TIGR02679 family protein. | NADPH-dependent FMN reductase. | 0.400 |
SHF63431.1 | SHG51222.1 | SAMN05444320_104347 | SAMN05444320_109246 | TIGR02679 family protein. | Hypothetical protein. | 0.405 |
SHF63431.1 | SHG51280.1 | SAMN05444320_104347 | SAMN05444320_109248 | TIGR02679 family protein. | Protein of unknown function. | 0.401 |
SHF63431.1 | SHG90960.1 | SAMN05444320_104347 | SAMN05444320_11650 | TIGR02679 family protein. | TIGR02680 family protein. | 0.709 |
SHF63431.1 | SHG90992.1 | SAMN05444320_104347 | SAMN05444320_11651 | TIGR02679 family protein. | TIGR02678 family protein. | 0.664 |
SHF63431.1 | SHG91027.1 | SAMN05444320_104347 | SAMN05444320_11652 | TIGR02679 family protein. | TIGR02677 family protein. | 0.578 |
SHF63452.1 | SHF63405.1 | SAMN05444320_104348 | SAMN05444320_104346 | Putative exonuclease SbcCD, C subunit. | Hypothetical protein. | 0.773 |
SHF63452.1 | SHF63431.1 | SAMN05444320_104348 | SAMN05444320_104347 | Putative exonuclease SbcCD, C subunit. | TIGR02679 family protein. | 0.906 |
SHF63452.1 | SHF63481.1 | SAMN05444320_104348 | SAMN05444320_104349 | Putative exonuclease SbcCD, C subunit. | Protein of unknown function. | 0.810 |
SHF63452.1 | SHF63510.1 | SAMN05444320_104348 | SAMN05444320_104350 | Putative exonuclease SbcCD, C subunit. | TIGR02677 family protein. | 0.773 |
SHF63452.1 | SHG90992.1 | SAMN05444320_104348 | SAMN05444320_11651 | Putative exonuclease SbcCD, C subunit. | TIGR02678 family protein. | 0.730 |
SHF63452.1 | SHG91027.1 | SAMN05444320_104348 | SAMN05444320_11652 | Putative exonuclease SbcCD, C subunit. | TIGR02677 family protein. | 0.648 |
page 1 of 3