STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF55885.1Hypothetical protein. (344 aa)    
Predicted Functional Partners:
SHF55858.1
Hypothetical protein.
 
    0.959
SHF55790.1
Hypothetical protein.
 
    0.912
SHF55826.1
Putative baseplate assembly protein.
 
     0.895
SHF55684.1
Phage protein D.
 
    0.888
SHF55653.1
LysM domain-containing protein.
 
     0.875
SHF55712.1
Type VI secretion system, phage-baseplate injector.
 
     0.861
SHF55557.1
Hypothetical protein.
 
    0.859
SHF55498.1
Hypothetical protein.
 
    0.848
SHF55531.1
Conserved hypothetical phage tail region protein.
 
     0.846
SHF55588.1
Conserved hypothetical phage tail region protein.
 
     0.844
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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