STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF83889.1Two component transcriptional regulator, LuxR family. (218 aa)    
Predicted Functional Partners:
SHF83862.1
Histidine kinase-like ATPase domain-containing protein.
  0.961
SHG38249.1
Signal transduction histidine kinase.
 
  0.837
SHF60967.1
Signal transduction histidine kinase.
 
  0.836
SHE56825.1
Signal transduction histidine kinase.
 
  0.835
SHF15120.1
Signal transduction histidine kinase.
 
  0.835
SHH11330.1
Signal transduction histidine kinase.
 
  0.832
SHG86251.1
Signal transduction histidine kinase.
 
  0.813
SHE60012.1
Signal transduction histidine kinase.
  
   0.735
SHF88275.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
     0.719
SHF61234.1
Signal transduction histidine kinase.
  
   0.716
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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