STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tlmR3Taurine dioxygenase, alpha-ketoglutarate-dependent. (348 aa)    
Predicted Functional Partners:
SHF85841.1
Nonribosomal peptide synthetase protein BlmV.
  
 0.991
SHF85784.1
Nonribosomal peptide synthetase protein BlmVII.
    0.986
SHF85728.1
Nonribosomal peptide synthetase protein BlmIX.
    0.982
SHF85692.1
Nonribosomal peptide synthetase protein BlmX.
    0.979
SHG69553.1
Amino acid adenylation domain-containing protein.
  
 0.979
SHF85811.1
Nonribosomal peptide synthetase protein BlmVI.
  
 0.970
SHG69585.1
Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein.
  
 0.967
SHE94003.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
 0.962
SHF27262.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
    0.945
SHG60643.1
Amino acid adenylation domain-containing protein.
  
 0.933
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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