STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tlmBProtein N-acetyltransferase, RimJ/RimL family. (292 aa)    
Predicted Functional Partners:
SHF31476.1
Glutamate synthase (NADPH/NADH) large chain.
   
 
  0.712
tlmH
Aspartate beta-hydroxylase.
 
     0.629
tlmK
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein.
  
    0.618
SHE45964.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.614
SHF67180.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.605
SHF85900.1
Aspartyl/Asparaginyl beta-hydroxylase.
  
     0.594
SHG02900.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.578
SHF86414.1
Aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
    0.545
SHF07106.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.483
SHG22473.1
Radical SAM superfamily protein.
  
    0.481
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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