STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF87038.1DNA-binding transcriptional regulator, CsgD family. (343 aa)    
Predicted Functional Partners:
SHF27541.1
Regulatory protein, luxR family.
  
   0.678
SHF28714.1
Regulatory protein, luxR family.
  
   0.678
SHG82349.1
Regulatory protein, luxR family.
  
   0.678
SHH00540.1
Regulatory protein, luxR family.
  
   0.678
SHH00569.1
Regulatory protein, luxR family.
  
   0.678
SHG07721.1
Hypothetical protein.
  
     0.616
SHE57372.1
Ribosomal protein S18 acetylase RimI.
  
     0.584
SHF87008.1
Hypothetical protein.
       0.535
SHG63060.1
Snapalysin.
  
     0.503
SHE58076.1
Hypothetical protein.
  
     0.493
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.