STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF88363.1Transcriptional regulator, TetR family. (206 aa)    
Predicted Functional Partners:
SHF88395.1
Predicted arabinose efflux permease, MFS family.
       0.514
SHF88422.1
Hypothetical protein.
       0.473
SHF79870.1
Transcriptional regulator, TetR family.
  
     0.470
SHG36455.1
Transcriptional regulator, TetR family.
  
     0.469
SHG57690.1
Transcriptional regulator, TetR family.
  
     0.457
SHE94648.1
Transcriptional regulator, TetR family.
  
     0.446
SHE57152.1
Transcriptional regulator, TetR family.
  
     0.433
SHF88333.1
ATPase components of ABC transporters with duplicated ATPase domains.
       0.427
SHG03093.1
Transcriptional regulator, TetR family.
  
     0.417
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.