STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF89839.1Transcriptional regulator, XRE family with cupin sensor. (199 aa)    
Predicted Functional Partners:
SHG12745.1
Transcriptional regulator, XRE family with cupin sensor.
 
  0.748
SHF03313.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
    
  0.690
SHF04453.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
  0.667
SHF67417.1
AraC-type DNA-binding protein.
  
 0.640
SHF91451.1
Transcriptional regulator, AraC family.
  
 0.640
SHH08615.1
AraC-type DNA-binding protein.
  
 0.640
SHG38897.1
UDP-N-acetylglucosamine 4,6-dehydratase.
  
 
 0.624
SHF89864.1
Predicted ATPase.
  
    0.566
SHE65495.1
UDPglucose 6-dehydrogenase.
  
 
 0.557
SHF88086.1
UDP-glucose dehydrogenase.
  
 
 0.557
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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