STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF90787.1ABC-2 type transport system ATP-binding protein. (302 aa)    
Predicted Functional Partners:
SHF90761.1
ABC-2 type transport system permease protein.
 
    0.954
SHF90735.1
Signal transduction histidine kinase.
 
    0.908
SHF90709.1
Two component transcriptional regulator, LuxR family.
     0.842
SHG03555.1
ABC-2 type transport system permease protein.
    0.677
SHF44246.1
Lipooligosaccharide transport system permease protein.
  
 
  0.646
SHG21462.1
ABC transporter efflux protein, DrrB family.
 
 0.633
SHF44222.1
Lipooligosaccharide transport system permease protein.
  
 
  0.620
SHE75893.1
Zinc/manganese transport system ATP-binding protein.
 
     
0.579
SHF34741.1
Hypothetical protein.
   
  0.550
SHG14411.1
ABC-2 type transport system permease protein.
   
  0.550
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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