STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF91317.1AraC family transcriptional regulator. (297 aa)    
Predicted Functional Partners:
SHF91294.1
Nicotinamidase-related amidase.
 
    0.640
SHF91341.1
Pimeloyl-ACP methyl ester carboxylesterase.
       0.605
SHG22246.1
Tat (twin-arginine translocation) pathway signal sequence.
  
     0.577
SHG04488.1
GDSL-like Lipase/Acylhydrolase family protein.
  
     0.553
SHF44480.1
Intein C-terminal splicing region/intein N-terminal splicing region.
  
     0.517
SHG20684.1
Short repeat-containing protein of unknown function.
  
     0.517
SHF91266.1
Hypothetical protein.
       0.511
SHG24177.1
Cytochrome P450.
  
     0.475
SHG82281.1
Trypsin.
  
     0.428
SHF83265.1
Methyltransferase domain-containing protein.
  
     0.424
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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