STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF80930.1Zinc transporter, ZIP family. (265 aa)    
Predicted Functional Partners:
SHF80905.1
DinB superfamily protein.
       0.661
SHH01851.1
Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
    0.553
SHF46003.1
Hypothetical protein.
  
    0.551
SHE48343.1
Cytochrome c-type biogenesis protein.
   
    0.527
SHF41191.1
Cytochrome c biogenesis protein CcdA.
   
    0.527
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
      
 0.483
SHF46237.1
Acetyltransferase (GNAT) family protein.
  
     0.466
SHF13390.1
Plasma-membrane calcium-translocating P-type ATPase.
  
  
 0.465
SHG97336.1
DNA-binding transcriptional regulator, MarR family.
  
     0.458
SHE94108.1
NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains.
   
    0.436
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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