Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHE49059.1 | SHF28489.1 | SAMN05444320_101224 | SAMN05444320_10377 | Acyl-CoA dehydrogenase. | acyl-CoA dehydrogenase. | 0.536 |
SHE49059.1 | SHG01811.1 | SAMN05444320_101224 | SAMN05444320_10675 | Acyl-CoA dehydrogenase. | acyl-CoA dehydrogenase. | 0.533 |
SHE49059.1 | SHG04828.1 | SAMN05444320_101224 | SAMN05444320_106178 | Acyl-CoA dehydrogenase. | Electron transfer flavoprotein beta subunit. | 0.950 |
SHE49059.1 | SHG04855.1 | SAMN05444320_101224 | SAMN05444320_106179 | Acyl-CoA dehydrogenase. | Electron transfer flavoprotein alpha subunit apoprotein. | 0.967 |
SHE49059.1 | SHG10552.1 | SAMN05444320_101224 | SAMN05444320_106388 | Acyl-CoA dehydrogenase. | acyl-CoA dehydrogenase. | 0.528 |
SHF28489.1 | SHE49059.1 | SAMN05444320_10377 | SAMN05444320_101224 | acyl-CoA dehydrogenase. | Acyl-CoA dehydrogenase. | 0.536 |
SHF28489.1 | SHF30442.1 | SAMN05444320_10377 | SAMN05444320_103150 | acyl-CoA dehydrogenase. | Acyl-CoA dehydrogenase. | 0.540 |
SHF28489.1 | SHF88115.1 | SAMN05444320_10377 | SAMN05444320_105330 | acyl-CoA dehydrogenase. | L-prolyl-[peptidyl carrier protein] dehydrogenase. | 0.572 |
SHF28489.1 | SHG04828.1 | SAMN05444320_10377 | SAMN05444320_106178 | acyl-CoA dehydrogenase. | Electron transfer flavoprotein beta subunit. | 0.930 |
SHF28489.1 | SHG04855.1 | SAMN05444320_10377 | SAMN05444320_106179 | acyl-CoA dehydrogenase. | Electron transfer flavoprotein alpha subunit apoprotein. | 0.948 |
SHF28489.1 | SHG35435.1 | SAMN05444320_10377 | SAMN05444320_108130 | acyl-CoA dehydrogenase. | (2S)-methylsuccinyl-CoA dehydrogenase. | 0.531 |
SHF28489.1 | SHG47720.1 | SAMN05444320_10377 | SAMN05444320_109141 | acyl-CoA dehydrogenase. | Acyl-CoA dehydrogenase. | 0.549 |
SHF28489.1 | SHG61797.1 | SAMN05444320_10377 | SAMN05444320_11137 | acyl-CoA dehydrogenase. | Hypothetical protein. | 0.558 |
SHF30442.1 | SHF28489.1 | SAMN05444320_103150 | SAMN05444320_10377 | Acyl-CoA dehydrogenase. | acyl-CoA dehydrogenase. | 0.540 |
SHF30442.1 | SHG01811.1 | SAMN05444320_103150 | SAMN05444320_10675 | Acyl-CoA dehydrogenase. | acyl-CoA dehydrogenase. | 0.526 |
SHF30442.1 | SHG04828.1 | SAMN05444320_103150 | SAMN05444320_106178 | Acyl-CoA dehydrogenase. | Electron transfer flavoprotein beta subunit. | 0.952 |
SHF30442.1 | SHG04855.1 | SAMN05444320_103150 | SAMN05444320_106179 | Acyl-CoA dehydrogenase. | Electron transfer flavoprotein alpha subunit apoprotein. | 0.971 |
SHF30442.1 | SHG10552.1 | SAMN05444320_103150 | SAMN05444320_106388 | Acyl-CoA dehydrogenase. | acyl-CoA dehydrogenase. | 0.537 |
SHF88115.1 | SHF28489.1 | SAMN05444320_105330 | SAMN05444320_10377 | L-prolyl-[peptidyl carrier protein] dehydrogenase. | acyl-CoA dehydrogenase. | 0.572 |
SHF88115.1 | SHG01811.1 | SAMN05444320_105330 | SAMN05444320_10675 | L-prolyl-[peptidyl carrier protein] dehydrogenase. | acyl-CoA dehydrogenase. | 0.577 |
page 1 of 4