STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG05142.1Chitinase. (333 aa)    
Predicted Functional Partners:
SHG49448.1
Chitinase.
 
  
  0.904
SHF11059.1
Chitinase.
 
  
  0.876
SHF30367.1
Chitinase family 18.
 
  
  0.854
SHG05171.1
Glycosyl hydrolases family 18.
 
  
 
0.837
SHG95556.1
Chitinase family 18.
 
  
  0.825
SHF68745.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
  
  0.752
SHE76870.1
beta-N-acetylhexosaminidase.
     
 0.723
SHE72947.1
beta-N-acetylhexosaminidase.
     
 0.723
SHF13134.1
Chitinase.
  
  
 
0.606
SHE68827.1
GlcNAc-PI de-N-acetylase.
  
     0.605
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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