STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG09179.1Two-component system, NarL family, sensor kinase. (385 aa)    
Predicted Functional Partners:
SHG09157.1
Two component transcriptional regulator, LuxR family.
 
  0.942
SHG87116.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.819
SHF55409.1
Two component transcriptional regulator, LuxR family.
  
  0.811
SHF88275.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.809
SHG74466.1
Two component transcriptional regulator, LuxR family.
  
  0.804
SHF87431.1
Signal transduction histidine kinase.
  
  
  0.784
SHE60686.1
Signal transduction histidine kinase.
  
  
  0.783
SHF90709.1
Two component transcriptional regulator, LuxR family.
  
  0.780
SHE99475.1
Signal transduction histidine kinase.
  
  
  0.776
SHE96867.1
Two component transcriptional regulator, LuxR family.
  
  0.774
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.