Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHE62491.1 | SHG10018.1 | SAMN05444320_101600 | SAMN05444320_106367 | Protein of unknown function. | Zn-dependent protease with chaperone function. | 0.533 |
SHF44880.1 | SHG10018.1 | SAMN05444320_103690 | SAMN05444320_106367 | Endonuclease-8; Belongs to the FPG family. | Zn-dependent protease with chaperone function. | 0.424 |
SHF67839.1 | SHG10018.1 | SAMN05444320_104511 | SAMN05444320_106367 | Saccharopine dehydrogenase, NADP-dependent. | Zn-dependent protease with chaperone function. | 0.436 |
SHG09989.1 | SHG10018.1 | SAMN05444320_106366 | SAMN05444320_106367 | Polysaccharide deacetylase. | Zn-dependent protease with chaperone function. | 0.418 |
SHG10018.1 | SHE62491.1 | SAMN05444320_106367 | SAMN05444320_101600 | Zn-dependent protease with chaperone function. | Protein of unknown function. | 0.533 |
SHG10018.1 | SHF44880.1 | SAMN05444320_106367 | SAMN05444320_103690 | Zn-dependent protease with chaperone function. | Endonuclease-8; Belongs to the FPG family. | 0.424 |
SHG10018.1 | SHF67839.1 | SAMN05444320_106367 | SAMN05444320_104511 | Zn-dependent protease with chaperone function. | Saccharopine dehydrogenase, NADP-dependent. | 0.436 |
SHG10018.1 | SHG09989.1 | SAMN05444320_106367 | SAMN05444320_106366 | Zn-dependent protease with chaperone function. | Polysaccharide deacetylase. | 0.418 |
SHG10018.1 | SHG10050.1 | SAMN05444320_106367 | SAMN05444320_106368 | Zn-dependent protease with chaperone function. | Chymotrypsin. Serine peptidase. MEROPS family S01A. | 0.417 |
SHG10050.1 | SHG10018.1 | SAMN05444320_106368 | SAMN05444320_106367 | Chymotrypsin. Serine peptidase. MEROPS family S01A. | Zn-dependent protease with chaperone function. | 0.417 |