STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG10335.1ATP-dependent DNA helicase RecG. (126 aa)    
Predicted Functional Partners:
SHG10361.1
Protein of unknown function.
       0.815
SHG10385.1
Trk system potassium uptake protein TrkA.
  
     0.757
SHG10408.1
Trk system potassium uptake protein TrkA.
  
     0.755
SHG10429.1
Amino acid/polyamine/organocation transporter, APC superfamily.
  
     0.748
SHG10312.1
Pimeloyl-ACP methyl ester carboxylesterase.
       0.668
SHF34963.1
TIGR03085 family protein.
  
   
 0.591
SHF34471.1
Phage shock protein A (PspA) family protein.
  
  
 0.586
SHF45108.1
DNA polymerase-3 subunit epsilon.
 
  
 0.584
SHE77969.1
Zn-dependent protease with chaperone function.
  
    0.572
SHF43711.1
Competence protein ComEC.
 
   
 0.568
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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