STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG14140.1Transcriptional regulator, GntR family. (271 aa)    
Predicted Functional Partners:
SHG14113.1
PTS system, N-acetylglucosamine-specific IIC component.
 
   
 0.861
SHG14087.1
Phosphocarrier protein.
     
 0.667
SHG14210.1
PTS system N-acetylglucosamine-specific IIA component, Glc family.
 
  
 0.644
SHH13409.1
MutL C terminal dimerisation domain-containing protein.
  
     0.637
SHG14177.1
PTS system N-acetylglucosamine-specific IIB component, Glc family.
 
  
 0.621
SHH13150.1
Regulatory protein, gntR family.
  
     0.582
SHF67417.1
AraC-type DNA-binding protein.
   
    0.525
SHF91680.1
Predicted transcriptional regulator, ArsR family.
   
  
 0.513
SHE55898.1
N-acetylglucosamine-6-phosphate deacetylase.
 
  
 0.485
SHF28430.1
Transcriptional attenuator, LytR family.
   
    0.469
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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