STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG26061.1Hypothetical protein. (1865 aa)    
Predicted Functional Partners:
SHG26029.1
Hypothetical protein.
       0.831
SHF68664.1
Hypothetical protein.
  
     0.760
SHE61844.1
L-ascorbate metabolism protein UlaG, beta-lactamase superfamily.
  
    0.750
SHH01238.1
PPE-repeat protein.
  
 
   0.713
SHE98744.1
Helix-turn-helix domain-containing protein.
  
     0.699
SHH03280.1
Hypothetical protein.
  
     0.682
SHF39420.1
Endonuclease, Uma2 family (restriction endonuclease fold).
  
     0.648
SHH09996.1
Transcriptional regulator, contains XRE-family HTH domain.
  
     0.633
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.611
SHG21834.1
Transcriptional regulator, MarR family.
  
     0.611
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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