STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG27362.1dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. (688 aa)    
Predicted Functional Partners:
SHG27389.1
Radical SAM additional 4Fe4S-binding SPASM domain-containing protein.
    
  0.785
SHF54128.1
Amino acid adenylation domain-containing protein.
  
  0.784
SHF88790.1
Non-ribosomal peptide synthetase terminal domain of unknown function.
  
  0.784
SHF89500.1
Non-ribosomal peptide synthetase terminal domain of unknown function; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  0.784
SHG38897.1
UDP-N-acetylglucosamine 4,6-dehydratase.
 
 
 0.738
SHG67317.1
NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family.
 
 
  0.655
SHG47545.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
  0.603
SHG27438.1
Perosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family.
 
    
0.593
SHF03620.1
UDP-N-acetyl-D-glucosamine dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.542
SHG21352.1
Predicted oxidoreductase.
  
 
  0.542
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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