STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG20903.1Transcriptional regulator, TetR family. (186 aa)    
Predicted Functional Partners:
SHF65502.1
Transcriptional regulator, TetR family.
  
     0.736
SHG25469.1
Transcriptional regulator, TetR family.
  
     0.733
SHF16069.1
Transcriptional regulator, TetR family.
  
     0.682
SHF57024.1
Transcriptional regulator, TetR family.
  
     0.639
SHF12877.1
Transcriptional regulator, TetR family.
  
     0.638
SHG20994.1
Glyoxylase, beta-lactamase superfamily II.
 
     0.638
SHG20971.1
Predicted arabinose efflux permease, MFS family.
 
     0.606
SHG20927.1
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A; Belongs to the amidase family.
       0.528
SHG20949.1
Hypothetical protein.
       0.528
SHF85900.1
Aspartyl/Asparaginyl beta-hydroxylase.
  
     0.527
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.