STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG55613.1SagB-type dehydrogenase domain-containing protein. (358 aa)    
Predicted Functional Partners:
SHG55645.1
Hypothetical protein.
 
    0.844
SHG55672.1
Hypothetical protein.
       0.774
SHF36332.1
uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase.
    
 0.694
SHE48875.1
Uroporphyrinogen III methyltransferase / synthase.
  
 
 0.647
SHG36551.1
Adenylyltransferase and sulfurtransferase.
    
  0.610
SHF17302.1
Ribosomal protein S12 methylthiotransferase accessory factor.
 
    0.575
SHF59787.1
Ribosomal protein S12 methylthiotransferase accessory factor.
 
    0.539
SHH13203.1
Helix-turn-helix domain-containing protein.
  
     0.508
SHG91289.1
Probable phosphoglycerate mutase.
    
  0.504
SHH11896.1
Hypothetical protein.
  
     0.472
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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