STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG62990.1Uncharacterized OsmC-related protein. (154 aa)    
Predicted Functional Partners:
SHF59178.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
    
  0.608
SHG62951.1
CRISPR-associated helicase, Cas3 family.
       0.497
SHG62884.1
CRISPR system Cascade subunit CasB.
       0.490
SHG62913.1
CRISPR system Cascade subunit CasA.
       0.490
SHG62758.1
CRISPR-associated protein, Cse3 family.
       0.473
SHG62808.1
CRISPR system Cascade subunit CasD.
       0.473
SHG62846.1
CRISPR system Cascade subunit CasC.
       0.473
SHG45690.1
Hypothetical protein.
      
 0.461
SHF87321.1
Hypothetical protein.
  
     0.429
SHF87511.1
Tetratricopeptide repeat-containing protein.
  
     0.406
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.