STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG66733.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (224 aa)    
Predicted Functional Partners:
SHG66766.1
Signal transduction histidine kinase.
   0.972
SHG61209.1
Two-component system, OmpR family, sensor kinase.
 0.927
SHE49630.1
Two-component system, OmpR family, sensor histidine kinase SenX3.
  0.919
SHG89578.1
Signal transduction histidine kinase.
 0.916
SHF84257.1
Two-component system, OmpR family, sensor kinase.
 0.913
SHG10650.1
Hypothetical protein.
 0.910
SHG57852.1
Two-component system, OmpR family, sensor histidine kinase MprB.
 0.894
SHG46264.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
 0.879
SHG33286.1
Signal transduction histidine kinase.
 
   0.878
SHF38918.1
Signal transduction histidine kinase.
   0.876
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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