STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG75138.1Transcriptional regulator, TetR family. (252 aa)    
Predicted Functional Partners:
SHG68281.1
Transcriptional regulator, TetR family.
  
     0.740
SHE96272.1
Transcriptional regulator, TetR family.
  
     0.684
SHF59234.1
Transcriptional regulator, TetR family.
  
     0.682
SHF15652.1
Transcriptional regulator, TetR family.
  
     0.678
SHG75170.1
2-polyprenyl-6-methoxyphenol hydroxylase.
 
     0.667
SHG75439.1
Transcriptional regulator, TetR family.
  
     0.648
SHE76369.1
Transcriptional regulator, TetR family.
  
     0.635
SHF08437.1
Transcriptional regulator, TetR family.
  
     0.603
SHG21813.1
Transcriptional regulator, TetR family.
  
     0.569
SHG75110.1
Hypothetical protein.
       0.559
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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