STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG94868.1Protein of unknown function. (181 aa)    
Predicted Functional Partners:
SHG94909.1
Helix-turn-helix.
 
     0.894
SHG94834.1
Hypothetical protein.
       0.793
SHG89347.1
Hypothetical protein.
 
    0.792
SHG94798.1
Imidazolonepropionase.
       0.773
SHG35638.1
ParB-like nuclease domain-containing protein.
  
     0.469
SHF65913.1
Arginine beta-hydroxylase, Fe(II)/alpha-ketoglutarate-dependent.
  
     0.445
SHE77138.1
PPE-repeat protein.
  
     0.439
SHF00533.1
Short repeat-containing protein of unknown function.
  
     0.429
SHG94946.1
Hypothetical protein.
       0.428
SHG96051.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
     0.412
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.