Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHE48677.1 | SHE48875.1 | SAMN05444320_101218 | SAMN05444320_101219 | Porphobilinogen synthase; Belongs to the ALAD family. | Uroporphyrinogen III methyltransferase / synthase. | 0.999 |
SHE48677.1 | SHF36332.1 | SAMN05444320_101218 | SAMN05444320_103354 | Porphobilinogen synthase; Belongs to the ALAD family. | uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase. | 0.974 |
SHE48677.1 | SHG36839.1 | SAMN05444320_101218 | SAMN05444320_108177 | Porphobilinogen synthase; Belongs to the ALAD family. | uroporphyrinogen-III synthase. | 0.827 |
SHE48677.1 | hemA | SAMN05444320_101218 | SAMN05444320_101221 | Porphobilinogen synthase; Belongs to the ALAD family. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.946 |
SHE48677.1 | hemA-2 | SAMN05444320_101218 | SAMN05444320_11933 | Porphobilinogen synthase; Belongs to the ALAD family. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.824 |
SHE48677.1 | hemC-3 | SAMN05444320_101218 | SAMN05444320_11932 | Porphobilinogen synthase; Belongs to the ALAD family. | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.969 |
SHE48677.1 | hemE | SAMN05444320_101218 | SAMN05444320_106403 | Porphobilinogen synthase; Belongs to the ALAD family. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.708 |
SHE48677.1 | hemE-2 | SAMN05444320_101218 | SAMN05444320_11930 | Porphobilinogen synthase; Belongs to the ALAD family. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.701 |
SHE48677.1 | hemL | SAMN05444320_101218 | SAMN05444320_101211 | Porphobilinogen synthase; Belongs to the ALAD family. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.989 |
SHE48875.1 | SHE48677.1 | SAMN05444320_101219 | SAMN05444320_101218 | Uroporphyrinogen III methyltransferase / synthase. | Porphobilinogen synthase; Belongs to the ALAD family. | 0.999 |
SHE48875.1 | SHF36332.1 | SAMN05444320_101219 | SAMN05444320_103354 | Uroporphyrinogen III methyltransferase / synthase. | uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase. | 0.997 |
SHE48875.1 | SHG36839.1 | SAMN05444320_101219 | SAMN05444320_108177 | Uroporphyrinogen III methyltransferase / synthase. | uroporphyrinogen-III synthase. | 0.962 |
SHE48875.1 | SHH03898.1 | SAMN05444320_101219 | SAMN05444320_11931 | Uroporphyrinogen III methyltransferase / synthase. | Porphobilinogen synthase; Belongs to the ALAD family. | 0.997 |
SHE48875.1 | hemA | SAMN05444320_101219 | SAMN05444320_101221 | Uroporphyrinogen III methyltransferase / synthase. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.990 |
SHE48875.1 | hemA-2 | SAMN05444320_101219 | SAMN05444320_11933 | Uroporphyrinogen III methyltransferase / synthase. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.924 |
SHE48875.1 | hemC-3 | SAMN05444320_101219 | SAMN05444320_11932 | Uroporphyrinogen III methyltransferase / synthase. | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.999 |
SHE48875.1 | hemE | SAMN05444320_101219 | SAMN05444320_106403 | Uroporphyrinogen III methyltransferase / synthase. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.918 |
SHE48875.1 | hemE-2 | SAMN05444320_101219 | SAMN05444320_11930 | Uroporphyrinogen III methyltransferase / synthase. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.861 |
SHE48875.1 | hemL | SAMN05444320_101219 | SAMN05444320_101211 | Uroporphyrinogen III methyltransferase / synthase. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.958 |
SHF36332.1 | SHE48677.1 | SAMN05444320_103354 | SAMN05444320_101218 | uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase. | Porphobilinogen synthase; Belongs to the ALAD family. | 0.974 |
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