STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH08146.1DNA-binding transcriptional regulator, FadR family. (251 aa)    
Predicted Functional Partners:
SHE47044.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
    
  0.668
SHF85181.1
Ferredoxin-NADP reductase.
    
  0.668
SHG21788.1
Ferredoxin-NADP reductase.
    
  0.668
SHH08207.1
gluconate:H+ symporter, GntP family.
 
   
 0.666
SHF29073.1
Transcriptional regulator, GntR family.
  
  
 0.648
SHF12648.1
DNA-binding transcriptional regulator, GntR family.
  
  
 0.630
SHF02865.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
 
  
 0.626
SHH08180.1
Gluconate kinase, SKI family.
 
   
 0.614
SHF32761.1
Transcriptional regulator, GntR family.
  
  
 0.566
SHG09833.1
Transcriptional regulator, GntR family.
  
     0.530
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.